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mreD protein (Prevotella amnii) - STRING interaction network
"mreD" - Rod shape-determining protein MreD in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mreDRod shape-determining protein MreD (166 aa)    
Predicted Functional Partners:
HMPREF9018_1564
Cell cycle protein, FtsW/RodA/SpoVE family (501 aa)
 
          0.958
HMPREF9018_1565
Putative penicillin-binding protein 2 (711 aa)
 
          0.938
mreC
Rod shape-determining protein MreC (295 aa)
 
          0.911
HMPREF9018_1568
Cell shape determining protein, MreB/Mrl family (340 aa)
              0.868
HMPREF9018_1569
MGS-like domain protein (197 aa)
              0.795
HMPREF9018_0179
Uncharacterized protein (213 aa)
   
          0.678
secG
Preprotein translocase, SecG subunit (122 aa)
   
          0.664
HMPREF9018_0894
Uncharacterized protein (387 aa)
   
          0.643
HMPREF9018_1758
Alpha-2-macroglobulin family protein (1850 aa)
   
          0.625
HMPREF9018_1171
Uncharacterized protein (204 aa)
   
          0.609
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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