STRINGSTRING
HMPREF9018_1572 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1572" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1572Uncharacterized protein (257 aa)    
Predicted Functional Partners:
HMPREF9018_1770
Uncharacterized protein (299 aa)
   
          0.751
HMPREF9018_1919
Uncharacterized protein (467 aa)
   
          0.693
HMPREF9018_1574
Uncharacterized protein (384 aa)
 
          0.563
HMPREF9018_1494
Uncharacterized protein (76 aa)
   
          0.539
HMPREF9018_0183
Uncharacterized protein (477 aa)
   
          0.536
fbp
D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 (671 aa)
              0.526
HMPREF9018_0986
Uncharacterized protein (90 aa)
   
          0.515
HMPREF9018_1970
Transporter, major facilitator family protein (541 aa)
   
          0.504
HMPREF9018_0252
TonB-dependent receptor plug domain protein (799 aa)
   
          0.495
HMPREF9018_1769
Uncharacterized protein (65 aa)
   
          0.484
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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