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rfbC protein (Prevotella amnii) - STRING interaction network
"rfbC" - dTDP-4-dehydrorhamnose 3,5-epimerase in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase (184 aa)    
Predicted Functional Partners:
rfbD
dTDP-4-dehydrorhamnose reductase (289 aa)
 
  0.999
rfbB
dTDP-glucose 4,6-dehydratase (384 aa)
 
 
  0.998
HMPREF9018_1732
Uncharacterized protein (257 aa)
   
  0.902
HMPREF9018_0515
NAD dependent epimerase/dehydratase family protein (350 aa)
   
  0.884
HMPREF9018_1169
Polysaccharide biosynthesis protein (649 aa)
   
 
  0.872
fcl
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase ; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (403 aa)
   
  0.868
HMPREF9018_1643
NAD dependent epimerase/dehydratase family protein (319 aa)
   
  0.868
HMPREF9018_1071
NAD dependent epimerase/dehydratase family protein (332 aa)
   
  0.868
dnaJ
Chaperone protein DnaJ ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] (382 aa)
       
    0.736
glf
UDP-galactopyranose mutase (387 aa)
   
   
  0.727
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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