STRINGSTRING
HMPREF9018_1616 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1616" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1616Uncharacterized protein (156 aa)    
Predicted Functional Partners:
HMPREF9018_1614
Beta-ketoacyl synthase, C-terminal domain protein (561 aa)
 
          0.966
HMPREF9018_1617
Uncharacterized protein (277 aa)
 
          0.953
lolA
Outer membrane lipoprotein carrier protein LolA (206 aa)
 
          0.946
HMPREF9018_1612
Beta-ketoacyl synthase, C-terminal domain protein (587 aa)
 
          0.941
HMPREF9018_1608
Uncharacterized protein (132 aa)
 
          0.935
HMPREF9018_1607
Glycosyltransferase, group 2 family protein (498 aa)
 
          0.929
HMPREF9018_1605
Uncharacterized protein (502 aa)
 
          0.921
HMPREF9018_1606
Uncharacterized protein (502 aa)
 
          0.921
HMPREF9018_1615
Acyl-CoA thioester hydrolase, YbgC/YbaW family (140 aa)
 
          0.919
HMPREF9018_1621
Beta-ketoacyl synthase, C-terminal domain protein (408 aa)
 
          0.915
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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