STRINGSTRING
HMPREF9018_1620 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1620" - Uncharacterized protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1620Uncharacterized protein (176 aa)    
Predicted Functional Partners:
HMPREF9018_1621
Beta-ketoacyl synthase, C-terminal domain protein (408 aa)
              0.756
HMPREF9018_1619
O-methyltransferase (365 aa)
              0.709
HMPREF9018_1618
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (80 aa)
              0.674
HMPREF9018_1617
Uncharacterized protein (277 aa)
              0.576
HMPREF9018_1622
Oxidoreductase, short chain dehydrogenase/reductase family protein (246 aa)
              0.565
HMPREF9018_1616
Uncharacterized protein (156 aa)
              0.518
HMPREF9018_1615
Acyl-CoA thioester hydrolase, YbgC/YbaW family (140 aa)
              0.518
HMPREF9018_1623
Uncharacterized protein (44 aa)
              0.493
HMPREF9018_1614
Beta-ketoacyl synthase, C-terminal domain protein (561 aa)
              0.483
HMPREF9018_1613
Putative acyl carrier protein (85 aa)
              0.455
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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