STRINGSTRING
HMPREF9018_1638 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1638" - Uncharacterized protein in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1638Uncharacterized protein (480 aa)    
Predicted Functional Partners:
HMPREF9018_1354
DNA helicase (1140 aa)
 
  0.980
HMPREF9018_1637
DNA/RNA non-specific endonuclease (207 aa)
   
        0.830
recO
Recombination protein O ; Involved in DNA repair and RecF pathway recombination (241 aa)
 
          0.716
dnaN
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
   
 
  0.705
HMPREF9018_1636
Uncharacterized protein (80 aa)
              0.640
polA
DNA-directed DNA polymerase (945 aa)
   
 
  0.636
HMPREF9018_1579
Sporulation and cell division repeat protein (323 aa)
   
          0.590
HMPREF9018_1639
DNA primase ; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (645 aa)
 
   
  0.582
tilS
tRNA(Ile)-lysidine synthetase ; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine (456 aa)
 
   
  0.548
recA
Recombinase A ; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (341 aa)
   
 
  0.538
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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