STRINGSTRING
HMPREF9018_1652 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1652" - PASTA domain protein in Prevotella amnii
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1652PASTA domain protein (255 aa)    
Predicted Functional Partners:
HMPREF9018_1651
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (361 aa)
              0.900
ddl
D-alanylalanine synthetase ; Cell wall formation (332 aa)
       
    0.876
alr
Alanine racemase (849 aa)
       
    0.753
HMPREF9018_0259
Peptidylprolyl isomerase (715 aa)
   
          0.744
murF
D-alanyl-D-alanine-adding enzyme ; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein (441 aa)
       
    0.707
HMPREF9018_1704
Uncharacterized protein (73 aa)
 
          0.647
HMPREF9018_1581
Uncharacterized protein (261 aa)
   
          0.641
HMPREF9018_1649
Uncharacterized protein (218 aa)
              0.637
HMPREF9018_0893
Tetratricopeptide repeat protein (368 aa)
   
          0.635
HMPREF9018_0687
Uncharacterized protein (282 aa)
   
          0.630
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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