STRINGSTRING
galK protein (Prevotella amnii) - STRING interaction network
"galK" - Galactokinase in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase (386 aa)    
Predicted Functional Partners:
HMPREF9018_1660
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (363 aa)
  0.999
galE
UDP-glucose 4-epimerase (345 aa)
   
  0.983
HMPREF9018_1190
Lactase (1056 aa)
 
   
  0.777
HMPREF9018_1962
Oxidoreductase, aldo/keto reductase family protein (298 aa)
   
 
  0.716
HMPREF9018_0705
Oxidoreductase, NAD-binding domain protein (328 aa)
 
 
  0.696
HMPREF9018_1659
Transporter, major facilitator family protein (438 aa)
   
        0.647
polA
DNA-directed DNA polymerase (945 aa)
         
  0.519
HMPREF9018_1657
TonB-dependent receptor plug domain protein (686 aa)
              0.512
HMPREF9018_1850
Transcriptional regulator, LacI family (350 aa)
         
  0.479
HMPREF9018_1656
Uncharacterized protein (39 aa)
              0.471
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (6%) [HD]