STRINGSTRING
HMPREF9018_1659 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1659" - Transporter, major facilitator family protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1659Transporter, major facilitator family protein (438 aa)    
Predicted Functional Partners:
galK
Galactokinase (386 aa)
   
        0.647
HMPREF9018_2051
Sodium bile acid symporter family protein (322 aa)
   
          0.616
HMPREF9018_1088
Uncharacterized protein (706 aa)
   
          0.592
HMPREF9018_0005
Uncharacterized protein (379 aa)
   
          0.569
HMPREF9018_0006
Uncharacterized protein (251 aa)
 
          0.567
HMPREF9018_0336
OmpA family protein (344 aa)
   
          0.534
HMPREF9018_1660
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (363 aa)
   
        0.510
HMPREF9018_1846
Alpha amylase, catalytic domain protein (609 aa)
 
        0.471
HMPREF9018_1720
Uncharacterized protein (416 aa)
   
          0.457
HMPREF9018_0060
Glycosyltransferase, group 1 family protein (422 aa)
   
        0.417
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (8%) [HD]