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HMPREF9018_1670 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1670" - ABC transporter, ATP-binding protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1670ABC transporter, ATP-binding protein (579 aa)    
Predicted Functional Partners:
HMPREF9018_0970
Sugar isomerase, KpsF/GutQ family (324 aa)
   
  0.928
HMPREF9018_1672
Transcriptional regulator, TetR family (204 aa)
 
          0.923
HMPREF9018_1669
Uncharacterized protein (790 aa)
 
          0.885
HMPREF9018_1671
ABC transporter, ATP-binding protein (584 aa)
 
       
0.872
HMPREF9018_1667
Uncharacterized protein (444 aa)
 
          0.850
HMPREF9018_1668
Uncharacterized protein (259 aa)
 
          0.820
lolD
Lipoprotein-releasing system ATP-binding protein LolD ; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner (228 aa)
 
0.797
lpxC
UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (461 aa)
   
 
  0.793
guaB
Inosine-5’-monophosphate dehydrogenase (494 aa)
   
  0.784
HMPREF9018_0537
ABC transporter, ATP-binding protein (290 aa)
0.783
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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