STRINGSTRING
nadB protein (Prevotella amnii) - STRING interaction network
"nadB" - L-aspartate oxidase in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nadBL-aspartate oxidase ; Catalyzes the oxidation of L-aspartate to iminoaspartate (525 aa)    
Predicted Functional Partners:
nadA
Quinolinate synthase ; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate (330 aa)
 
  0.999
nadC
Nicotinate-nucleotide diphosphorylase (Carboxylating) (290 aa)
   
  0.986
panD
Aspartate alpha-decarboxylase ; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (114 aa)
   
 
  0.873
nadE
NAD+ synthase (655 aa)
       
  0.853
HMPREF9018_0174
Lactate/malate dehydrogenase, NAD binding domain protein (328 aa)
   
   
  0.839
pyrB
Aspartate transcarbamylase (315 aa)
       
  0.819
HMPREF9018_1576
Aspartokinase (443 aa)
         
  0.816
HMPREF9018_0181
Putative aspartate ammonia-lyase (472 aa)
         
  0.816
HMPREF9018_0814
L-asparaginase, type I (347 aa)
       
    0.798
purA
IMP--aspartate ligase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (424 aa)
       
    0.797
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (4%) [HD]