STRINGSTRING
HMPREF9018_1689 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1689" - FAH family protein in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
HMPREF9018_1689FAH family protein (205 aa)    
Predicted Functional Partners:
HMPREF9018_1213
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type (546 aa)
       
    0.803
sdhA
Succinate dehydrogenase flavoprotein subunit (634 aa)
   
 
    0.765
dnaN
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
     
      0.757
HMPREF9018_1039
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit (251 aa)
   
 
    0.720
HMPREF9018_1146
4-phosphoerythronate dehydrogenase (323 aa)
   
 
    0.719
HMPREF9018_0897
4-phosphoerythronate dehydrogenase (305 aa)
   
 
    0.717
ilvE
Branched-chain-amino-acid transaminase (338 aa)
       
    0.711
HMPREF9018_0807
Uncharacterized protein (195 aa)
       
    0.711
glpC
Glycerol-3-phosphate dehydrogenase, anaerobic, C subunit (416 aa)
   
 
    0.709
HMPREF9018_1384
Cysteine-rich domain protein (243 aa)
   
 
    0.709
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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