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HMPREF9018_1692 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1692" - ABC transporter, ATP-binding protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1692ABC transporter, ATP-binding protein (558 aa)    
Predicted Functional Partners:
HMPREF9018_0970
Sugar isomerase, KpsF/GutQ family (324 aa)
 
  0.939
HMPREF9018_1691
Antioxidant, AhpC/TSA family (326 aa)
     
  0.859
HMPREF9018_2011
Uncharacterized protein (129 aa)
 
          0.853
HMPREF9018_1837
ABC transporter, ATP-binding protein (273 aa)
 
  0.823
lpxC
UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (461 aa)
   
 
  0.793
HMPREF9018_2012
Uncharacterized protein (161 aa)
 
          0.791
HMPREF9018_0537
ABC transporter, ATP-binding protein (290 aa)
0.790
guaB
Inosine-5’-monophosphate dehydrogenase (494 aa)
   
  0.784
HMPREF9018_2013
Uncharacterized protein (295 aa)
 
          0.783
HMPREF9018_1030
ABC transporter, ATP-binding protein (234 aa)
 
0.767
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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