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waaA protein (Prevotella amnii) - STRING interaction network
"waaA" - 3-deoxy-D-manno-octulosonic-acid transferase in Prevotella amnii
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
waaA3-deoxy-D-manno-octulosonic-acid transferase (406 aa)    
Predicted Functional Partners:
lpxK
Lipid A 4’-kinase ; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (412 aa)
  0.991
kdsB
CMP-2-keto-3-deoxyoctulosonic acid synthase ; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria (245 aa)
 
  0.980
HMPREF9018_1005
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase (319 aa)
 
  0.961
lpxB
Lipid-A-disaccharide synthase ; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (382 aa)
 
 
  0.958
HMPREF9018_1066
Heptosyltransferase (348 aa)
 
 
  0.929
lpxC
UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (461 aa)
 
 
  0.866
HMPREF9018_1711
Uncharacterized protein (166 aa)
              0.859
HMPREF9018_0970
Sugar isomerase, KpsF/GutQ family (324 aa)
 
   
  0.857
HMPREF9018_1869
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family (172 aa)
   
 
  0.852
lpxD
UDP-3-O-acylglucosamine N-acyltransferase ; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (346 aa)
 
   
  0.823
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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