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trpS protein (Prevotella amnii) - STRING interaction network
"trpS" - Tryptophan--tRNA ligase in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpSTryptophan--tRNA ligase (362 aa)    
Predicted Functional Partners:
pheT
Phenylalanyl-tRNA synthetase beta subunit (822 aa)
   
   
  0.853
serS
Serine--tRNA ligase (429 aa)
   
 
  0.798
rpsJ
30S ribosomal protein S10 ; Involved in the binding of tRNA to the ribosomes (101 aa)
   
 
  0.739
gltX
Glutamyl-tRNA synthetase ; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (530 aa)
   
   
  0.735
metG
Methionyl-tRNA synthetase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (687 aa)
   
   
  0.726
pheS
Phenylalanyl-tRNA synthetase alpha subunit (346 aa)
   
   
  0.682
argS
Arginyl-tRNA synthetase (606 aa)
   
   
  0.658
waaA
3-deoxy-D-manno-octulosonic-acid transferase (406 aa)
              0.652
HMPREF9018_1711
Uncharacterized protein (166 aa)
              0.644
thrS
Threonyl-tRNA synthetase (650 aa)
   
   
  0.643
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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