STRINGSTRING
HMPREF9018_1739 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1739" - Peptidase, M28 family in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1739Peptidase, M28 family (343 aa)    
Predicted Functional Partners:
HMPREF9018_1740
Renal dipeptidase family protein (618 aa)
 
          0.863
HMPREF9018_0031
Pectinesterase inhibitor domain protein (200 aa)
   
          0.718
HMPREF9018_1204
Uncharacterized protein (130 aa)
   
          0.641
HMPREF9018_1741
Transcriptional regulator, AsnC family (158 aa)
              0.630
HMPREF9018_0351
Peptidase, S41 family (334 aa)
   
          0.625
HMPREF9018_2005
Uncharacterized protein (182 aa)
   
          0.533
HMPREF9018_1936
Uncharacterized protein (333 aa)
   
          0.511
HMPREF9018_0376
Uncharacterized protein (664 aa)
   
          0.503
HMPREF9018_0693
Uncharacterized protein (264 aa)
   
          0.477
HMPREF9018_0288
GSCFA family protein (269 aa)
   
          0.455
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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