STRINGSTRING
HMPREF9018_1770 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1770" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1770Uncharacterized protein (299 aa)    
Predicted Functional Partners:
HMPREF9018_1572
Uncharacterized protein (257 aa)
   
          0.751
HMPREF9018_1665
Uncharacterized protein (565 aa)
   
          0.732
HMPREF9018_1919
Uncharacterized protein (467 aa)
   
          0.714
HMPREF9018_1918
TonB-linked outer membrane protein, SusC/RagA family (930 aa)
   
          0.607
HMPREF9018_1792
Radical SAM domain protein (490 aa)
   
          0.597
HMPREF9018_0922
DNA primase ; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (1319 aa)
   
          0.574
HMPREF9018_1772
Conjugative transposon protein TraQ (161 aa)
              0.566
HMPREF9018_1771
Uncharacterized protein (168 aa)
              0.564
HMPREF9018_1774
Conjugative transposon TraN protein (316 aa)
              0.548
HMPREF9018_1773
Conjugative transposon protein TraO (197 aa)
              0.548
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (7%) [HD]