STRINGSTRING
HMPREF9018_1808 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1808" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1808Uncharacterized protein (486 aa)    
Predicted Functional Partners:
HMPREF9018_1809
Uncharacterized protein (102 aa)
            0.945
HMPREF9018_1312
Uncharacterized protein (396 aa)
   
          0.678
HMPREF9018_1807
Uncharacterized protein (154 aa)
            0.579
HMPREF9018_0958
Site-specific recombinase, phage integrase family (405 aa)
   
          0.557
HMPREF9018_2035
Uncharacterized protein (697 aa)
   
          0.511
HMPREF9018_1598
PAP2 family protein (241 aa)
   
          0.489
HMPREF9018_0741
Uncharacterized protein (234 aa)
   
          0.476
HMPREF9018_0429
VRR-NUC domain protein (136 aa)
   
          0.465
HMPREF9018_1806
Uncharacterized protein (100 aa)
              0.410
HMPREF9018_0740
TonB-dependent receptor (783 aa)
   
          0.408
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (12%) [HD]