STRINGSTRING
HMPREF9018_1827 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1827" - AMP-binding enzyme in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1827AMP-binding enzyme (613 aa)    
Predicted Functional Partners:
HMPREF9018_0604
Acyl-CoA dehydrogenase, C-terminal domain protein (569 aa)
   
  0.933
HMPREF9018_1601
AMP-binding enzyme (433 aa)
 
 
  0.902
HMPREF9018_0405
MaoC-like protein (154 aa)
   
 
  0.857
HMPREF9018_0157
AMP-binding enzyme (553 aa)
   
   
 
0.852
HMPREF9018_0848
Uncharacterized protein (333 aa)
   
 
  0.803
HMPREF9018_1828
Putative peptide chain release factor 2 (374 aa)
   
        0.782
HMPREF9018_1604
Uncharacterized protein (292 aa)
   
 
    0.730
HMPREF9018_0502
Uncharacterized protein (274 aa)
   
 
    0.730
HMPREF9018_1621
Beta-ketoacyl synthase, C-terminal domain protein (408 aa)
   
 
  0.722
HMPREF9018_1614
Beta-ketoacyl synthase, C-terminal domain protein (561 aa)
   
 
  0.722
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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