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HMPREF9018_1846 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1846" - Alpha amylase, catalytic domain protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1846Alpha amylase, catalytic domain protein (609 aa)    
Predicted Functional Partners:
HMPREF9018_1848
Putative 4-alpha-glucanotransferase (897 aa)
 
  0.994
glgP
Alpha-glucan phosphorylase (852 aa)
   
  0.992
pulA
Pullulanase, type I (637 aa)
 
  0.986
HMPREF9018_1088
Uncharacterized protein (706 aa)
 
   
    0.946
HMPREF9018_0886
Starch synthase catalytic domain protein (269 aa)
 
  0.891
HMPREF9018_0593
1,4-alpha-glucan branching enzyme (689 aa)
 
 
0.880
HMPREF9018_1025
Alpha-amylase (646 aa)
 
   
    0.835
HMPREF9018_1934
HAD hydrolase, family IA, variant 3 (221 aa)
   
 
  0.817
tig
Trigger factor (455 aa)
   
      0.813
rplW
50S ribosomal protein L23 ; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (147 aa)
     
      0.808
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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