• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
EFN90422.1 protein (Prevotella amnii) - STRING interaction network
"EFN90422.1" - Alpha amylase, catalytic domain protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFN90422.1Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128; match to protein family HMM PF09087; Belongs to the glycosyl hydrolase 13 family (609 aa)    
Predicted Functional Partners:
EFN90429.1
Putative 4-alpha-glucanotransferase; Identified by match to protein family HMM PF02446 (897 aa)
 
  0.993
pulA
Pullulanase, type I; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02104; Belongs to the glycosyl hydrolase 13 family (637 aa)
 
  0.990
glgP
Alpha-glucan phosphorylase; Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094 (852 aa)
   
  0.989
EFN91767.1
annotation not available (706 aa)
 
 
  0.961
EFN91824.1
Alpha-amylase; Identified by match to protein family HMM PF00128 (646 aa)
 
   
    0.884
EFN90437.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690 (442 aa)
 
     
  0.856
EFN90862.1
Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128 (554 aa)
 
   
0.843
EFN90233.1
Putative glycogen debranching enzyme, archaeal type; Identified by match to protein family HMM PF06202 (654 aa)
   
  0.834
EFN91541.1
1,4-alpha-glucan branching enzyme; Identified by match to protein family HMM PF00128; match to protein family HMM PF02806; match to protein family HMM PF02922 (689 aa)
 
 
0.830
EFN90460.1
Identified by match to protein family HMM PF07980 (544 aa)
 
     
  0.822
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (12%) [HD]