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dnaX protein (Prevotella amnii) - STRING interaction network
"dnaX" - DNA polymerase III, subunit gamma and tau in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaXDNA polymerase III, subunit gamma and tau (590 aa)    
Predicted Functional Partners:
HMPREF9018_0308
DNA-directed DNA polymerase (1241 aa)
 
  0.992
HMPREF9018_1953
Uncharacterized protein (381 aa)
 
0.992
holA
DNA polymerase III, delta subunit (342 aa)
 
  0.991
dnaN
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
   
  0.983
HMPREF9018_0857
Putative DNA polymerase III, epsilon subunit (183 aa)
   
  0.950
HMPREF9018_1202
Exonuclease (287 aa)
   
  0.945
HMPREF9018_0912
Single-stranded DNA-binding protein (137 aa)
   
 
  0.935
polA
DNA-directed DNA polymerase (945 aa)
   
 
  0.905
dnaB
Replicative DNA helicase ; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (505 aa)
   
 
  0.881
pyk
Pyruvate kinase (481 aa)
       
  0.874
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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