STRINGSTRING
HMPREF9018_1876 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1876" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1876Uncharacterized protein (148 aa)    
Predicted Functional Partners:
coaE
Dephosphocoenzyme A kinase ; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (192 aa)
            0.965
HMPREF9018_1878
Uncharacterized protein (336 aa)
 
          0.870
HMPREF9018_0287
Uncharacterized protein (840 aa)
   
          0.755
HMPREF9018_0882
Uncharacterized protein (182 aa)
   
          0.748
hemD
Uroporphyrinogen-III synthase (251 aa)
   
          0.745
HMPREF9018_0258
Uncharacterized protein (1110 aa)
   
          0.737
HMPREF9018_1940
Uncharacterized protein (586 aa)
   
          0.728
HMPREF9018_0818
Uncharacterized protein (128 aa)
   
          0.707
HMPREF9018_0273
Uncharacterized protein (78 aa)
   
          0.702
HMPREF9018_0703
DNA-binding helix-turn-helix protein (148 aa)
   
          0.696
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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