STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
N utilization substance protein B homolog ; Involved in the transcription termination process (313 aa)
Predicted Functional Partners:
30S ribosomal protein S10 ; Involved in the binding of tRNA to the ribosomes (101 aa)
Riboflavin biosynthesis protein RibBA ; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (402 aa)
Preprotein translocase, YajC subunit (107 aa)
Uncharacterized protein (336 aa)
Dephosphocoenzyme A kinase ; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (192 aa)
6,7-dimethyl-8-ribityllumazine synthase ; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (158 aa)
1-deoxyxylulose-5-phosphate synthase ; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (642 aa)
Uncharacterized protein (148 aa)
DNA-directed DNA polymerase (945 aa)
Exodeoxyribonuclease 7 large subunit ; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (439 aa)
Your Current Organism:
NCBI taxonomy Id: 679191 Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A