STRINGSTRING
rny protein (Prevotella amnii) - STRING interaction network
"rny" - Ribonuclease Y in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnyRibonuclease Y ; Endoribonuclease that initiates mRNA decay (513 aa)    
Predicted Functional Partners:
HMPREF9018_1952
PSP1 C-terminal domain protein (427 aa)
 
          0.765
HMPREF9018_1905
Cell division protein ZapA ; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division (97 aa)
              0.728
HMPREF9018_1139
DHHA1 domain protein (346 aa)
 
   
    0.694
HMPREF9018_1327
S1 RNA binding domain protein (523 aa)
       
    0.668
HMPREF9018_1904
Uncharacterized protein (63 aa)
              0.623
HMPREF9018_1993
HDIG domain protein (474 aa)
 
   
    0.574
holA
DNA polymerase III, delta subunit (342 aa)
              0.529
HMPREF9018_0587
FtsK/SpoIIIE family protein (820 aa)
 
          0.527
rnz
tRNase Z ; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (304 aa)
       
  0.521
pheT
Phenylalanyl-tRNA synthetase beta subunit (822 aa)
              0.513
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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