STRINGSTRING
dps protein (Prevotella amnii) - STRING interaction network
"dps" - DNA protection during starvation protein in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
dpsDNA protection during starvation protein (157 aa)    
Predicted Functional Partners:
ligA
Polydeoxyribonucleotide synthase [NAD(+)] ; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (676 aa)
     
 
  0.793
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (467 aa)
     
      0.705
clpB
Chaperone protein ClpB ; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE (863 aa)
   
 
  0.635
HMPREF9018_0883
ATPase family associated with various cellular activities (AAA) (871 aa)
   
 
  0.635
lysS
Lysyl-tRNA synthetase (577 aa)
     
      0.511
nifJ
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1191 aa)
           
  0.503
HMPREF9018_1932
Glycerol-3-phosphate dehydrogenase (351 aa)
              0.467
pgi
Phosphohexose isomerase (452 aa)
              0.460
HMPREF9018_1929
Oxidoreductase, short chain dehydrogenase/reductase family protein (233 aa)
              0.458
HMPREF9018_0711
LysR substrate binding domain protein (312 aa)
         
  0.447
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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