STRINGSTRING
HMPREF9018_1940 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1940" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1940Uncharacterized protein (586 aa)    
Predicted Functional Partners:
HMPREF9018_0033
Uncharacterized protein (507 aa)
   
          0.734
HMPREF9018_1876
Uncharacterized protein (148 aa)
   
          0.728
HMPREF9018_0288
GSCFA family protein (269 aa)
 
          0.727
lpxK
Lipid A 4’-kinase ; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (412 aa)
 
            0.717
HMPREF9018_0016
Uncharacterized protein (203 aa)
   
          0.714
HMPREF9018_1404
Uncharacterized protein (155 aa)
   
          0.671
HMPREF9018_1726
Uncharacterized protein (140 aa)
   
          0.662
HMPREF9018_0703
DNA-binding helix-turn-helix protein (148 aa)
   
          0.642
HMPREF9018_1354
DNA helicase (1140 aa)
 
          0.596
HMPREF9018_0201
Uncharacterized protein (382 aa)
   
          0.573
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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