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HMPREF9018_1946 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1946" - ABC transporter, ATP-binding protein in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
HMPREF9018_1946ABC transporter, ATP-binding protein (598 aa)    
Predicted Functional Partners:
engB
Probable GTP-binding protein EngB ; Necessary for normal cell division and for the maintenance of normal septation (201 aa)
   
        0.867
rplA
50S ribosomal protein L1 ; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (230 aa)
   
      0.806
rplE
50S ribosomal protein L5 ; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (185 aa)
   
      0.803
rpsG
30S ribosomal protein S7 ; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (158 aa)
   
      0.689
metG
Methionyl-tRNA synthetase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (687 aa)
 
        0.553
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (514 aa)
   
        0.547
feoB
Ferrous iron transport protein B ; Fe(2+) uptake system, probably driven by GTP (824 aa)
              0.536
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (267 aa)
   
 
  0.533
HMPREF9018_0027
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (684 aa)
 
      0.510
guaB
Inosine-5’-monophosphate dehydrogenase (494 aa)
   
      0.476
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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