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hemN protein (Prevotella amnii) - STRING interaction network
"hemN" - Coproporphyrinogen-III oxidase in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemNCoproporphyrinogen-III oxidase (454 aa)    
Predicted Functional Partners:
hemG
Protoporphyrinogen oxidase (458 aa)
 
 
  0.944
HMPREF9018_0816
Putative oxygen-independent coproporphyrinogen III oxidase (381 aa)
 
 
0.862
prmC
Protein-(Glutamine-N5) methyltransferase, release factor-specific (286 aa)
   
 
    0.780
HMPREF9018_0204
Transporter, major facilitator family protein (403 aa)
 
        0.745
HMPREF9018_0243
Putative 3-oxoacyl-(Acyl carrier protein) synthase III (378 aa)
       
    0.668
nifJ
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1191 aa)
         
  0.642
HMPREF9018_0203
TonB-dependent receptor plug domain protein (683 aa)
 
          0.538
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (782 aa)
   
   
  0.487
lepA
Ribosomal back-translocase LepA ; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (593 aa)
   
   
  0.475
apt
Adenine phosphoribosyltransferase ; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (176 aa)
         
  0.447
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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