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HMPREF9018_1952 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1952" - PSP1 C-terminal domain protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1952PSP1 C-terminal domain protein (427 aa)    
Predicted Functional Partners:
gldH
Gliding motility-associated lipoprotein GldH (165 aa)
              0.859
HMPREF9018_1953
Uncharacterized protein (381 aa)
 
          0.834
rny
Ribonuclease Y ; Endoribonuclease that initiates mRNA decay (513 aa)
 
          0.765
HMPREF9018_1950
Urea transporter (289 aa)
              0.570
metG
Methionyl-tRNA synthetase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (687 aa)
              0.568
HMPREF9018_0409
Transglycosylase (767 aa)
 
     
  0.519
ftsY
Signal recognition particle receptor FtsY ; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (317 aa)
     
      0.500
HMPREF9018_1954
Nucleotide sugar dehydrogenase (418 aa)
              0.462
HMPREF9018_0804
Transglycosylase (842 aa)
         
  0.447
pheT
Phenylalanyl-tRNA synthetase beta subunit (822 aa)
              0.436
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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