STRINGSTRING
HMPREF9018_1953 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1953" - Uncharacterized protein in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1953Uncharacterized protein (381 aa)    
Predicted Functional Partners:
HMPREF9018_0308
DNA-directed DNA polymerase (1241 aa)
 
  0.997
dnaN
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
 
  0.994
dnaX
DNA polymerase III, subunit gamma and tau (590 aa)
 
0.992
holA
DNA polymerase III, delta subunit (342 aa)
 
  0.991
polA
DNA-directed DNA polymerase (945 aa)
   
  0.981
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (782 aa)
   
  0.904
HMPREF9018_1804
DNA topoisomerase III (163 aa)
   
  0.863
HMPREF9018_1803
DNA topoisomerase (459 aa)
   
  0.863
HMPREF9018_1165
No annotation available (54 aa)
   
  0.863
HMPREF9018_0638
DNA topoisomerase (671 aa)
   
  0.863
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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