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HMPREF9018_1978 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1978" - Type I restriction enzyme HsdR protein N-terminal domain protein in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
HMPREF9018_1978Type I restriction enzyme HsdR protein N-terminal domain protein (148 aa)    
Predicted Functional Partners:
HMPREF9018_0283
Uncharacterized protein (113 aa)
   
          0.765
holA
DNA polymerase III, delta subunit (342 aa)
 
          0.764
HMPREF9018_0404
Putative zinc ribbon domain protein (274 aa)
   
          0.702
HMPREF9018_1977
DnaJ domain protein (278 aa)
 
          0.680
lspA
Signal peptidase II ; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (221 aa)
 
          0.649
dnaN
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
   
          0.598
HMPREF9018_1835
TonB-linked outer membrane protein, SusC/RagA family (1069 aa)
   
          0.583
yaeT
Outer membrane protein assembly complex, YaeT protein (871 aa)
   
          0.576
HMPREF9018_1111
Uncharacterized protein (432 aa)
   
          0.575
recO
Recombination protein O ; Involved in DNA repair and RecF pathway recombination (241 aa)
   
          0.572
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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