STRINGSTRING
HMPREF9018_1981 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1981" - Transcriptional regulator, DeoR family in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1981Transcriptional regulator, DeoR family (263 aa)    
Predicted Functional Partners:
trxA
Thioredoxin (104 aa)
     
      0.700
HMPREF9018_1980
Uncharacterized protein (383 aa)
              0.697
HMPREF9018_1850
Transcriptional regulator, LacI family (350 aa)
 
     
  0.637
HMPREF9018_0758
Antioxidant, AhpC/TSA family (384 aa)
 
 
      0.603
HMPREF9018_1992
Antioxidant, AhpC/TSA family (278 aa)
 
 
      0.583
glpA
Glycerol-3-phosphate dehydrogenase (538 aa)
 
     
  0.532
HMPREF9018_1691
Antioxidant, AhpC/TSA family (326 aa)
     
      0.523
galK
Galactokinase (386 aa)
         
  0.448
HMPREF9018_0705
Oxidoreductase, NAD-binding domain protein (328 aa)
 
     
  0.442
polA
DNA-directed DNA polymerase (945 aa)
   
   
  0.441
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (8%) [HD]