STRINGSTRING
HMPREF9018_1985 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1985" - HDIG domain protein in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
HMPREF9018_1985HDIG domain protein (178 aa)    
Predicted Functional Partners:
HMPREF9018_1986
HMGL-like protein (592 aa)
              0.620
HMPREF9018_1246
Isopentenyl-diphosphate-tRNA isopentenyltransferase ; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (307 aa)
 
     
  0.619
HMPREF9018_1327
S1 RNA binding domain protein (523 aa)
 
   
    0.547
pheT
Phenylalanyl-tRNA synthetase beta subunit (822 aa)
              0.513
HMPREF9018_1139
DHHA1 domain protein (346 aa)
       
    0.491
HMPREF9018_1993
HDIG domain protein (474 aa)
       
    0.487
metG
Methionyl-tRNA synthetase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (687 aa)
         
  0.451
HMPREF9018_1987
Uncharacterized protein (272 aa)
              0.445
HMPREF9018_0213
Competence/damage-inducible domain protein CinA (167 aa)
         
  0.432
HMPREF9018_1988
Uncharacterized protein (150 aa)
              0.428
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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