STRINGSTRING
HMPREF9018_1988 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1988" - Uncharacterized protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1988Uncharacterized protein (150 aa)    
Predicted Functional Partners:
HMPREF9018_1987
Uncharacterized protein (272 aa)
              0.819
HMPREF9018_0963
FG-GAP repeat protein (1919 aa)
   
          0.694
HMPREF9018_1073
TonB-dependent receptor plug domain protein (823 aa)
   
          0.619
HMPREF9018_0578
Uncharacterized protein (90 aa)
   
          0.612
HMPREF9018_1948
Glutamate--ammonia ligase, catalytic domain protein (501 aa)
   
          0.606
HMPREF9018_0704
Uncharacterized protein (378 aa)
   
          0.586
HMPREF9018_1986
HMGL-like protein (592 aa)
              0.584
HMPREF9018_0030
Uncharacterized protein (64 aa)
   
          0.531
HMPREF9018_1989
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein (1007 aa)
 
          0.521
HMPREF9018_2047
Uncharacterized protein (178 aa)
   
          0.515
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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