STRINGSTRING
HMPREF9018_1989 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1989" - Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1989Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein (1007 aa)    
Predicted Functional Partners:
HMPREF9018_0765
Transcriptional regulator, LacI family (354 aa)
   
          0.688
HMPREF9018_0586
Uncharacterized protein (204 aa)
   
          0.564
HMPREF9018_0830
Uncharacterized protein (408 aa)
   
          0.556
HMPREF9018_0766
Putative membrane protein (312 aa)
   
          0.544
HMPREF9018_1988
Uncharacterized protein (150 aa)
 
          0.521
HMPREF9018_1373
Uncharacterized protein (297 aa)
   
          0.474
HMPREF9018_0988
Uncharacterized protein (254 aa)
   
          0.449
HMPREF9018_0731
Uncharacterized protein (219 aa)
   
          0.448
HMPREF9018_1987
Uncharacterized protein (272 aa)
              0.440
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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