STRINGSTRING
rpe protein (Prevotella amnii) - STRING interaction network
"rpe" - Ribulose-phosphate 3-epimerase in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
rpeRibulose-phosphate 3-epimerase (216 aa)    
Predicted Functional Partners:
HMPREF9018_1277
Transketolase ; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (666 aa)
  0.999
HMPREF9018_1079
Phosphoribulokinase/uridine kinase family protein (553 aa)
   
  0.923
rpiB
Ribose-5-phosphate isomerase B (146 aa)
       
  0.910
rsgA
Ribosome small subunit-dependent GTPase A ; May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover (314 aa)
            0.855
udk
Uridine monophosphokinase (207 aa)
   
 
  0.844
nifJ
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1191 aa)
   
 
    0.814
HMPREF9018_0970
Sugar isomerase, KpsF/GutQ family (324 aa)
   
 
  0.812
thrS
Threonyl-tRNA synthetase (650 aa)
   
    0.809
HMPREF9018_1090
Kinase, PfkB family (310 aa)
   
  0.798
pgk
Phosphoglycerate kinase (416 aa)
 
 
  0.790
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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