STRINGSTRING
HMPREF9018_2032 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_2032" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_2032Uncharacterized protein (88 aa)    
Predicted Functional Partners:
HMPREF9018_0150
Toprim domain family protein (342 aa)
 
          0.800
HMPREF9018_0065
Uncharacterized protein (41 aa)
   
          0.711
HMPREF9018_1488
Uncharacterized protein (102 aa)
   
          0.703
HMPREF9018_1156
DNA binding domain, excisionase family (102 aa)
   
          0.694
HMPREF9018_1490
Uncharacterized protein (132 aa)
   
          0.594
HMPREF9018_1158
Uncharacterized protein (132 aa)
   
          0.593
HMPREF9018_0866
Uncharacterized protein (154 aa)
   
          0.592
HMPREF9018_2031
Uncharacterized protein (54 aa)
              0.526
HMPREF9018_2033
Uncharacterized protein (79 aa)
              0.499
HMPREF9018_1152
Uncharacterized protein (349 aa)
   
          0.434
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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