STRINGSTRING
HMPREF9018_2037 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_2037" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_2037Uncharacterized protein (116 aa)    
Predicted Functional Partners:
HMPREF9018_1473
MutS domain I protein (1326 aa)
   
          0.663
HMPREF9018_0151
Uncharacterized protein (511 aa)
   
          0.624
HMPREF9018_0141
Conjugation system ATPase, TraG family (981 aa)
   
          0.581
HMPREF9018_0340
Uncharacterized protein (469 aa)
   
          0.527
HMPREF9018_1164
Uncharacterized protein (467 aa)
   
          0.490
HMPREF9018_2061
Putative transposase, Mutator family (262 aa)
   
          0.439
HMPREF9018_1270
Uncharacterized protein (52 aa)
   
          0.435
HMPREF9018_2020
Transcription termination/antitermination factor NusG (191 aa)
   
          0.417
HMPREF9018_1363
Uncharacterized protein (348 aa)
   
          0.409
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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