STRINGSTRING
HMPREF9018_2052 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_2052" - Rubredoxin in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_2052Rubredoxin (53 aa)    
Predicted Functional Partners:
HMPREF9018_1089
Metallo-beta-lactamase domain protein (396 aa)
 
     
  0.553
nifJ
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1191 aa)
   
   
  0.545
HMPREF9018_2051
Sodium bile acid symporter family protein (322 aa)
              0.513
HMPREF9018_0899
Putative YigZ family protein (197 aa)
       
    0.479
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase ; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (505 aa)
       
    0.474
ftnA
Ferritin ; Iron-storage protein (158 aa)
   
   
  0.450
HMPREF9018_0068
Putative superoxide reductase (138 aa)
         
  0.445
HMPREF9018_1407
Transcriptional regulator, Fur family (166 aa)
         
  0.415
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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