STRINGSTRING
HMPREF9018_2061 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_2061" - Putative transposase, Mutator family in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_2061Putative transposase, Mutator family (262 aa)    
Predicted Functional Partners:
HMPREF9018_0123
Uncharacterized protein (477 aa)
   
          0.593
HMPREF9018_1773
Conjugative transposon protein TraO (197 aa)
   
          0.530
HMPREF9018_1482
Uncharacterized protein (147 aa)
   
          0.529
HMPREF9018_0966
TonB-dependent receptor (780 aa)
   
          0.495
HMPREF9018_1894
Uncharacterized protein (354 aa)
   
          0.484
HMPREF9018_0460
Conjugative transposon protein TraO (192 aa)
   
          0.442
HMPREF9018_2037
Uncharacterized protein (116 aa)
   
          0.439
HMPREF9018_0459
Conjugative transposon protein TraQ (156 aa)
   
          0.434
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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