Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC05532.1 | EFC05533.1 | HMPREF9013_1235 | HMPREF9013_1236 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | 0.828 |
| EFC05532.1 | EFC05534.1 | HMPREF9013_1235 | HMPREF9013_1237 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | 0.867 |
| EFC05532.1 | EFC05535.1 | HMPREF9013_1235 | HMPREF9013_1238 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.821 |
| EFC05532.1 | EFC05536.1 | HMPREF9013_1235 | HMPREF9013_1239 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.896 |
| EFC05532.1 | EFC05537.1 | HMPREF9013_1235 | HMPREF9013_1240 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185. | 0.886 |
| EFC05533.1 | EFC05532.1 | HMPREF9013_1236 | HMPREF9013_1235 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.828 |
| EFC05533.1 | EFC05534.1 | HMPREF9013_1236 | HMPREF9013_1237 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | 0.892 |
| EFC05533.1 | EFC05535.1 | HMPREF9013_1236 | HMPREF9013_1238 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.821 |
| EFC05533.1 | EFC05536.1 | HMPREF9013_1236 | HMPREF9013_1239 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.895 |
| EFC05533.1 | EFC05537.1 | HMPREF9013_1236 | HMPREF9013_1240 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185. | 0.892 |
| EFC05533.1 | EFC06143.1 | HMPREF9013_1236 | HMPREF9013_0838 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.423 |
| EFC05533.1 | ecfA | HMPREF9013_1236 | HMPREF9013_0946 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.857 |
| EFC05534.1 | EFC05532.1 | HMPREF9013_1237 | HMPREF9013_1235 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.867 |
| EFC05534.1 | EFC05533.1 | HMPREF9013_1237 | HMPREF9013_1236 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | 0.892 |
| EFC05534.1 | EFC05535.1 | HMPREF9013_1237 | HMPREF9013_1238 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.980 |
| EFC05534.1 | EFC05536.1 | HMPREF9013_1237 | HMPREF9013_1239 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.986 |
| EFC05534.1 | EFC05537.1 | HMPREF9013_1237 | HMPREF9013_1240 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185. | 0.939 |
| EFC05534.1 | EFC05822.1 | HMPREF9013_1237 | HMPREF9013_0013 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | 0.655 |
| EFC05534.1 | EFC06143.1 | HMPREF9013_1237 | HMPREF9013_0838 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.949 |
| EFC05534.1 | EFC06144.1 | HMPREF9013_1237 | HMPREF9013_0839 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185. | 0.774 |
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