STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppcPutative phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (883 aa)    
Predicted Functional Partners:
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
 0.928
HMU07210
Putative Malate:quinone oxidoreductase; evidence=ISS; db_xref=cjejuni:Cj0393c; date=20070321; method=automatic:reciprocal fasta.
     
 0.927
ppsA
Putative phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
     
 0.927
gltA
Citrate synthase; evidence=ISS; db_xref=cjejuni:Cj1682c; date=20070321; method=automatic:reciprocal fasta; Belongs to the citrate synthase family.
     
 0.855
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.800
aspB
Aspartate aminotransferase; evidence=ISS; db_xref=cjejuni:Cj0762c; date=20070321; method=automatic:reciprocal fasta.
     
 0.545
HMU13390
Putative efflux protein (Multidrug resistance protein); evidence=ISS; db_xref=cjejuni:Cj1174; date=20070321; method=automatic:reciprocal fasta.
       0.487
HMU13400
Putative efflux protein (Multidrug resistance protein); evidence=ISS; db_xref=cjejuni:Cj1173; date=20070321; method=automatic:reciprocal fasta.
       0.487
tpiA
Putative triosephosphate isomerase; evidence=ISS; db_xref=cjejuni:Cj1401c; date=20070321; method=automatic:reciprocal fasta.
  
  
 0.472
pabB
Para-aminobenzoate synthase component I; evidence=ISS; db_xref=cjejuni:Cj0862c; date=20070321; method=automatic:reciprocal fasta.
  
  
 0.444
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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