STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG68190.1Putative secreted glycosidase; PMID:8299175. (475 aa)    
Predicted Functional Partners:
CBG68191.1
Putative secreted glycosidase; PMID:8299175; PMID:8837440.
 
  
 
0.798
CBG69077.1
Conserved hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.736
CBG71480.1
Putative membrane protein.
  
   
 0.730
CBG72743.1
Putative secreted protein; PMID:14565843.
 
     0.705
CBG74399.1
Putative secreted alpha-N-furanosidase.
   
 0.704
CBG69661.1
Conserved hypothetical protein.
  
     0.693
SCAB_3871
Putative secreted protein.
 
     0.669
CBG68189.1
Putative secreted protein.
 
     0.664
CBG69005.1
Conserved hypothetical protein.
 
     0.657
SCAB_6011
Putative glycosyl hydrolase/xylanase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.653
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.