STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureABFusion of urease beta and gamma subunits. (226 aa)    
Predicted Functional Partners:
ureC
Urease alpha subunit; Cluster 0586 with SCAB78391.
 0.999
ureC-2
Urease alpha subunit; Cluster 0586 with SCAB26901.
 0.999
ureB
Urease beta subunit; Belongs to the urease beta subunit family.
 
0.997
ureA
Urease gamma subunit; Belongs to the urease gamma subunit family.
 
0.996
ureG
Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.985
ureF
Urease accessroy protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.977
ureD
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.970
CBG74349.1
Urea carboxylase.
    
 0.939
CBG75639.1
Hydrogenase nickel incorporation protein HypB; Annotation transferred from E. coli.
  
  
 0.937
alc
Putative allantoicase; Belongs to the allantoicase family.
    
  0.921
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.