Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBG69075.1 | CBG70726.1 | SCAB_19541 | SCAB_36371 | Putative secreted protein. | Putative xylanase/cellulase; PMID: 12876348; PMID: 9251186. | 0.595 |
CBG69075.1 | CBG70792.1 | SCAB_19541 | SCAB_37051 | Putative secreted protein. | Putative secreted cellulase/xylanase. | 0.540 |
CBG69075.1 | CBG70793.1 | SCAB_19541 | SCAB_37061 | Putative secreted protein. | Conserved hypothetical protein. | 0.718 |
CBG69075.1 | CBG74044.1 | SCAB_19541 | SCAB_70511 | Putative secreted protein. | Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family. | 0.770 |
CBG69075.1 | CBG75421.1 | SCAB_19541 | SCAB_84741 | Putative secreted protein. | Putative secreted arabinase; Belongs to the glycosyl hydrolase 43 family. | 0.761 |
CBG69075.1 | CBG75427.1 | SCAB_19541 | SCAB_84801 | Putative secreted protein. | Putative secreted arabinase; Belongs to the glycosyl hydrolase 43 family. | 0.761 |
CBG69075.1 | SCAB_6021 | SCAB_19541 | SCAB_6021 | Putative secreted protein. | Putative glycosyl hydrolase. | 0.553 |
CBG70726.1 | CBG69075.1 | SCAB_36371 | SCAB_19541 | Putative xylanase/cellulase; PMID: 12876348; PMID: 9251186. | Putative secreted protein. | 0.595 |
CBG70726.1 | CBG70793.1 | SCAB_36371 | SCAB_37061 | Putative xylanase/cellulase; PMID: 12876348; PMID: 9251186. | Conserved hypothetical protein. | 0.704 |
CBG70726.1 | CBG74044.1 | SCAB_36371 | SCAB_70511 | Putative xylanase/cellulase; PMID: 12876348; PMID: 9251186. | Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family. | 0.602 |
CBG70726.1 | CBG75199.1 | SCAB_36371 | SCAB_82451 | Putative xylanase/cellulase; PMID: 12876348; PMID: 9251186. | Putative secreted protein. | 0.616 |
CBG70726.1 | CBG75421.1 | SCAB_36371 | SCAB_84741 | Putative xylanase/cellulase; PMID: 12876348; PMID: 9251186. | Putative secreted arabinase; Belongs to the glycosyl hydrolase 43 family. | 0.680 |
CBG70726.1 | CBG75427.1 | SCAB_36371 | SCAB_84801 | Putative xylanase/cellulase; PMID: 12876348; PMID: 9251186. | Putative secreted arabinase; Belongs to the glycosyl hydrolase 43 family. | 0.645 |
CBG70726.1 | xlnB | SCAB_36371 | SCAB_72711 | Putative xylanase/cellulase; PMID: 12876348; PMID: 9251186. | Putative secreted endo-1,4-beta-xylanase B (xylanase B); PMID:7533741; PMID:1743521; PMID:15650852; Belongs to the glycosyl hydrolase 11 (cellulase G) family. | 0.739 |
CBG70792.1 | CBG69075.1 | SCAB_37051 | SCAB_19541 | Putative secreted cellulase/xylanase. | Putative secreted protein. | 0.540 |
CBG70792.1 | CBG70793.1 | SCAB_37051 | SCAB_37061 | Putative secreted cellulase/xylanase. | Conserved hypothetical protein. | 0.902 |
CBG70792.1 | CBG74044.1 | SCAB_37051 | SCAB_70511 | Putative secreted cellulase/xylanase. | Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family. | 0.469 |
CBG70792.1 | CBG75199.1 | SCAB_37051 | SCAB_82451 | Putative secreted cellulase/xylanase. | Putative secreted protein. | 0.523 |
CBG70792.1 | CBG75421.1 | SCAB_37051 | SCAB_84741 | Putative secreted cellulase/xylanase. | Putative secreted arabinase; Belongs to the glycosyl hydrolase 43 family. | 0.657 |
CBG70792.1 | CBG75427.1 | SCAB_37051 | SCAB_84801 | Putative secreted cellulase/xylanase. | Putative secreted arabinase; Belongs to the glycosyl hydrolase 43 family. | 0.605 |
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