chb protein (Streptomyces scabiei) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

chb

Secreted chitin binding protein. (205 aa)

Predicted Functional Partners:

CBG72764.1

0.761

CBG72765.1

0.725

CBG72761.1

0.722

CBG75468.1

0.691

CBG74552.1

0.622

CBG72762.1

0.614

chiA

0.558

chiC

0.535

SCAB_0711

0.471

CBG72767.1

0.450

Your Current Organism:

Streptomyces scabiei

NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG72761.1	CBG72762.1	SCAB_57351	SCAB_57361	Putative membrane protein; Contains GC spike, repeat regions, hydrophobic and hydrophilic regions.	Putative membrane protein.	0.609
CBG72761.1	CBG72764.1	SCAB_57351	SCAB_57381	Putative membrane protein; Contains GC spike, repeat regions, hydrophobic and hydrophilic regions.	Putative membrane protein.	0.595
CBG72761.1	chb	SCAB_57351	SCAB_57371	Putative membrane protein; Contains GC spike, repeat regions, hydrophobic and hydrophilic regions.	Secreted chitin binding protein.	0.722
CBG72762.1	CBG72761.1	SCAB_57361	SCAB_57351	Putative membrane protein.	Putative membrane protein; Contains GC spike, repeat regions, hydrophobic and hydrophilic regions.	0.609
CBG72762.1	CBG72764.1	SCAB_57361	SCAB_57381	Putative membrane protein.	Putative membrane protein.	0.405
CBG72762.1	CBG72765.1	SCAB_57361	SCAB_57391	Putative membrane protein.	Putative AMP-binding enzyme.	0.450
CBG72762.1	chb	SCAB_57361	SCAB_57371	Putative membrane protein.	Secreted chitin binding protein.	0.614
CBG72764.1	CBG72761.1	SCAB_57381	SCAB_57351	Putative membrane protein.	Putative membrane protein; Contains GC spike, repeat regions, hydrophobic and hydrophilic regions.	0.595
CBG72764.1	CBG72762.1	SCAB_57381	SCAB_57361	Putative membrane protein.	Putative membrane protein.	0.405
CBG72764.1	CBG72765.1	SCAB_57381	SCAB_57391	Putative membrane protein.	Putative AMP-binding enzyme.	0.815
CBG72764.1	CBG72767.1	SCAB_57381	SCAB_57411	Putative membrane protein.	Putative two-component system response regulator.	0.482
CBG72764.1	chb	SCAB_57381	SCAB_57371	Putative membrane protein.	Secreted chitin binding protein.	0.761
CBG72765.1	CBG72762.1	SCAB_57391	SCAB_57361	Putative AMP-binding enzyme.	Putative membrane protein.	0.450
CBG72765.1	CBG72764.1	SCAB_57391	SCAB_57381	Putative AMP-binding enzyme.	Putative membrane protein.	0.815
CBG72765.1	CBG72767.1	SCAB_57391	SCAB_57411	Putative AMP-binding enzyme.	Putative two-component system response regulator.	0.661
CBG72765.1	chb	SCAB_57391	SCAB_57371	Putative AMP-binding enzyme.	Secreted chitin binding protein.	0.725
CBG72767.1	CBG72764.1	SCAB_57411	SCAB_57381	Putative two-component system response regulator.	Putative membrane protein.	0.482
CBG72767.1	CBG72765.1	SCAB_57411	SCAB_57391	Putative two-component system response regulator.	Putative AMP-binding enzyme.	0.661
CBG72767.1	chb	SCAB_57411	SCAB_57371	Putative two-component system response regulator.	Secreted chitin binding protein.	0.450
CBG74552.1	CBG75468.1	SCAB_75761	SCAB_85231	Putative chitinase/cellulase; PMID: 11315108; PMID: 8515228; cluster 0608 with SCAB28731 but this CDS lacks secretion signal; Belongs to the glycosyl hydrolase 18 family.	Chitinase.	0.775