STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG73402.1Putative secreted solute-binding protein. (364 aa)    
Predicted Functional Partners:
CBG73404.1
Putative transporter transmembrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 0.985
CBG73405.1
Putative transporter transmembrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 0.985
CBG73403.1
Putative transporter ATP-binding subunit.
 
 0.968
CBG69622.1
Putative sensory histidine kinase.
   
 
 0.909
CBG73171.1
Putative sensor kinase.
   
 
 0.880
CBG75927.1
Putative two-component sensor kinase.
  
 
 0.880
SCAB_0821
Conserved hypothetical protein; PAS domain may indicate role in signal detection.
   
 
 0.872
CBG68810.1
ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.832
CBG74874.1
Putative ABC transport system transmembrane component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.810
CBG68485.1
Putative sugar ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.802
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.