STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG75516.1Conserved hypothetical protein. (208 aa)    
Predicted Functional Partners:
CBG71393.1
Putative TetR-family regulator.
     
 0.605
CBG75517.1
Conserved hypothetical protein.
       0.576
CBG68909.1
Putative ADA-like regulatory protein.
  
  
 0.571
SCAB_7981
Conserved hypothetical protein.
  
    0.568
CBG72039.1
Conserved hypothetical protein.
  
     0.550
CBG74280.1
Putative FAD-binding protein.
       0.542
CBG68819.1
Putative oxidoreductase.
   
    0.456
CBG73276.1
Putative secreted protein; No db matches.
   
    0.456
CBG73456.1
Putative oxidoreductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.456
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.