STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG75694.1Conserved hypothetical protein. (297 aa)    
Predicted Functional Partners:
CBG73382.1
Conserved hypothetical protein.
  
  
 
0.918
CBG74038.1
Putative dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
    
 0.905
CBG75692.1
Putative aldolase.
     
 0.792
CBG75691.1
Putative galactonate dehydratase protein.
 
  
 0.782
CBG75693.1
Putative sugar kinase.
     
 0.764
CBG75690.1
Putative gntR-famly transcriptional regulator.
 
     0.707
CBG75689.1
Putative oxidoreductase.
  
    0.506
CBG73399.1
Putative dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.475
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.