STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJIAN_28Hypothetical protein. (133 aa)    
Predicted Functional Partners:
GAT63104.1
IMP dehydrogenase.
  
 
 0.820
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.757
PJIAN_253
Hypothetical protein.
  
     0.756
GAT64222.1
Hypothetical protein.
  
     0.737
PJIAN_252
Rhamnose utilisation protein RhaD.
  
     0.727
GAT62184.1
AhpC/TSA family protein.
  
     0.663
GAT63010.1
Hypothetical protein.
  
     0.662
GAT61942.1
Hypothetical protein.
  
     0.661
GAT63100.1
NigD-like protein.
  
     0.658
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
 0.633
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.